Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEX91582.1 | EEX92308.1 | VIA_002224 | VIA_002953 | Metallo-beta-lactamase family protein RNA-specific. | RNA-binding protein. | 0.986 |
EEX91582.1 | EEX92438.1 | VIA_002224 | VIA_003083 | Metallo-beta-lactamase family protein RNA-specific. | tPR domain protein putative component of TonB system. | 0.832 |
EEX91582.1 | EEX93375.1 | VIA_002224 | VIA_004022 | Metallo-beta-lactamase family protein RNA-specific. | MSHA biogenesis protein MshN. | 0.830 |
EEX91582.1 | EEX93431.1 | VIA_002224 | VIA_004078 | Metallo-beta-lactamase family protein RNA-specific. | Hypothetical protein. | 0.984 |
EEX91582.1 | EEX94174.1 | VIA_002224 | VIA_001332 | Metallo-beta-lactamase family protein RNA-specific. | Hypothetical protein. | 0.835 |
EEX91582.1 | apaH | VIA_002224 | VIA_000225 | Metallo-beta-lactamase family protein RNA-specific. | Bis(5'-nucleosyl)-tetraphosphatase symmetrical; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | 0.966 |
EEX91582.1 | gpmI | VIA_002224 | VIA_004097 | Metallo-beta-lactamase family protein RNA-specific. | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.986 |
EEX92308.1 | EEX91582.1 | VIA_002953 | VIA_002224 | RNA-binding protein. | Metallo-beta-lactamase family protein RNA-specific. | 0.986 |
EEX92308.1 | EEX93431.1 | VIA_002953 | VIA_004078 | RNA-binding protein. | Hypothetical protein. | 0.960 |
EEX92308.1 | apaH | VIA_002953 | VIA_000225 | RNA-binding protein. | Bis(5'-nucleosyl)-tetraphosphatase symmetrical; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | 0.834 |
EEX92308.1 | gpmI | VIA_002953 | VIA_004097 | RNA-binding protein. | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.992 |
EEX92438.1 | EEX91582.1 | VIA_003083 | VIA_002224 | tPR domain protein putative component of TonB system. | Metallo-beta-lactamase family protein RNA-specific. | 0.832 |
EEX92438.1 | EEX92891.1 | VIA_003083 | VIA_003536 | tPR domain protein putative component of TonB system. | Histone deacetylase/AcuC/AphA family protein. | 0.736 |
EEX92438.1 | EEX93431.1 | VIA_003083 | VIA_004078 | tPR domain protein putative component of TonB system. | Hypothetical protein. | 0.967 |
EEX92438.1 | EEX94174.1 | VIA_003083 | VIA_001332 | tPR domain protein putative component of TonB system. | Hypothetical protein. | 0.551 |
EEX92438.1 | alaS | VIA_003083 | VIA_003974 | tPR domain protein putative component of TonB system. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.981 |
EEX92438.1 | apaH | VIA_003083 | VIA_000225 | tPR domain protein putative component of TonB system. | Bis(5'-nucleosyl)-tetraphosphatase symmetrical; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | 0.660 |
EEX92438.1 | betA | VIA_003083 | VIA_002074 | tPR domain protein putative component of TonB system. | Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. | 0.941 |
EEX92891.1 | EEX92438.1 | VIA_003536 | VIA_003083 | Histone deacetylase/AcuC/AphA family protein. | tPR domain protein putative component of TonB system. | 0.736 |
EEX92891.1 | EEX93375.1 | VIA_003536 | VIA_004022 | Histone deacetylase/AcuC/AphA family protein. | MSHA biogenesis protein MshN. | 0.736 |
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