STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX93526.1NADP-dependent malic enzyme. (425 aa)    
Predicted Functional Partners:
EEX92717.1
Phosphate acetyltransferase.
 
 0.976
EEX92576.1
Fumarate hydratase class I aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
 
 
 0.929
EEX93323.1
Oxaloacetate decarboxylase alpha chain.
    
 0.878
EEX93891.1
Predicted D-lactate dehydrogenase Fe-S protein FAD/FMN-containing.
  
 
 0.874
EEX92205.1
Fe-S oxidoreductase; Similar to lactate dehydrogenase SO1521.
  
 
 0.874
EEX93610.1
Aspartate ammonia-lyase.
 
 
 0.823
EEX92627.1
Nitrate reductase; Ferredoxin-type protein NapF; periplasmic.
    
 0.817
napG
Ferredoxin-type protein NapG (periplasmic nitrate reductase).
    
 0.809
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate.
  
 0.786
EEX95289.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.765
Your Current Organism:
Vibrio orientalis
NCBI taxonomy Id: 675816
Other names: V. orientalis CIP 102891 = ATCC 33934, Vibrio orientalis ATCC 33934, Vibrio orientalis ATCC 33934 = CIP 102891, Vibrio orientalis CIP 102891, Vibrio orientalis CIP 102891 = ATCC 33934, Vibrio orientalis IFO 15638, Vibrio orientalis LMG 7987
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