A0A1E3PWS6 protein (Lipomyces starkeyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1E3PWS6

Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (311 aa)

Predicted Functional Partners:

A0A1E3Q908

0.988

A0A1E3Q7G5

0.987

A0A1E3Q2X2

0.938

A0A1E3PZ42

0.892

A0A1E3Q0P4

0.886

A0A1E3QD08

0.873

A0A1E3Q909

0.872

A0A1E3Q2U3

0.848

A0A1E3PVJ4

0.817

A0A1E3Q194

0.817

Your Current Organism:

Lipomyces starkeyi

NCBI taxonomy Id: 675824
Other names: L. starkeyi NRRL Y-11557, Lipomyces starkeyi NRRL Y-11557

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1E3PVJ4	A0A1E3PWS6	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.817
A0A1E3PVJ4	A0A1E3PZ42	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.647
A0A1E3PVJ4	A0A1E3Q0P4	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.674
A0A1E3PVJ4	A0A1E3Q194	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	0.520
A0A1E3PVJ4	A0A1E3Q2X2	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	Protein kinase domain-containing protein.	0.407
A0A1E3PVJ4	A0A1E3Q7G5	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	Uncharacterized protein.	0.458
A0A1E3PVJ4	A0A1E3Q908	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.647
A0A1E3PVJ4	A0A1E3QD08	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	Uncharacterized protein.	0.647
A0A1E3PWS6	A0A1E3PVJ4	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	0.817
A0A1E3PWS6	A0A1E3PZ42	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.892
A0A1E3PWS6	A0A1E3Q0P4	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.886
A0A1E3PWS6	A0A1E3Q194	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	0.817
A0A1E3PWS6	A0A1E3Q2U3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	MAP kinase kinase kinase.	0.848
A0A1E3PWS6	A0A1E3Q2X2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.938
A0A1E3PWS6	A0A1E3Q7G5	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.987
A0A1E3PWS6	A0A1E3Q908	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.988
A0A1E3PWS6	A0A1E3Q909	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	SH3 domain-containing protein; Plasma membrane osmosensor that activates the high osmolarity glycerol (HOG) MAPK signaling pathway in response to high osmolarity.	0.872
A0A1E3PWS6	A0A1E3QD08	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.873
A0A1E3PZ42	A0A1E3PVJ4	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	0.647
A0A1E3PZ42	A0A1E3PWS6	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.892