STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1E3PXM2Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (325 aa)    
Predicted Functional Partners:
A0A1E3Q6M2
Aminotran_5 domain-containing protein.
  
 0.962
A0A1E3Q0Q8
Tryptophan synthase.
  
 0.928
A0A1E3Q421
26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
 
      0.899
A0A1E3Q5U5
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
   
 0.829
A0A1E3Q6Z0
Uncharacterized protein.
    
 0.810
A0A1E3Q7J7
Uncharacterized protein.
    
 0.810
A0A1E3QBX2
Uncharacterized protein; Belongs to the cytochrome b5 family.
    
 0.810
A0A1E3Q8V6
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.806
A0A1E3QBG0
Uncharacterized protein.
  
 0.772
A0A1E3PZG7
Aminotran_5 domain-containing protein.
  
 
 0.767
Your Current Organism:
Lipomyces starkeyi
NCBI taxonomy Id: 675824
Other names: L. starkeyi NRRL Y-11557, Lipomyces starkeyi NRRL Y-11557
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