STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1E3PZA2Uncharacterized protein. (398 aa)    
Predicted Functional Partners:
A0A1E3Q387
MSP domain-containing protein.
    
 0.903
A0A1E3Q103
Uncharacterized protein.
 
      0.900
A0A1E3PX56
Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.
 
      0.747
A0A1E3Q9G2
UBA domain-containing protein.
   
 
 0.638
A0A1E3Q4W8
Uncharacterized protein; Belongs to the AAA ATPase family.
   
  0.535
A0A1E3QEX2
Uncharacterized protein; Belongs to the AAA ATPase family.
   
  0.535
A0A1E3Q4U4
PPM-type phosphatase domain-containing protein.
    
  0.467
A0A1E3Q6S3
Uncharacterized protein; Belongs to the OSBP family.
 
  
 0.424
A0A1E3QGM8
SAC domain-containing protein.
    
 
 0.410
A0A1E3PZV9
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 
 0.405
Your Current Organism:
Lipomyces starkeyi
NCBI taxonomy Id: 675824
Other names: L. starkeyi NRRL Y-11557, Lipomyces starkeyi NRRL Y-11557
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