STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1E3PZJ6Nsp1_C domain-containing protein. (792 aa)    
Predicted Functional Partners:
A0A1E3QF58
Nup54 domain-containing protein.
    
 0.999
A0A1E3PV74
Uncharacterized protein.
   
 0.996
A0A1E3QBM2
Nuclear pore protein.
   
 0.996
A0A1E3Q1P2
Uncharacterized protein.
   
 0.992
A0A1E3Q2G3
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.989
A0A1E3Q548
Uncharacterized protein.
   
 0.989
A0A1E3Q5R3
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.986
A0A1E3Q3B6
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.984
A0A1E3QGN7
Peptidase S59 domain-containing protein.
   
0.983
A0A1E3PYT0
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
    
 0.977
Your Current Organism:
Lipomyces starkeyi
NCBI taxonomy Id: 675824
Other names: L. starkeyi NRRL Y-11557, Lipomyces starkeyi NRRL Y-11557
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