STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1E3Q2L4Uncharacterized protein. (1424 aa)    
Predicted Functional Partners:
A0A1E3QF20
Phosphotransferase.
   
 
 0.608
A0A1E3PWP7
PfkB domain-containing protein.
  
 
 0.605
A0A1E3PYR3
RibD_C domain-containing protein.
  
 
 0.605
RBK1
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
 
 0.605
A0A1E3QG10
PfkB domain-containing protein.
  
 
 0.605
A0A1E3Q0K3
Phosphotransferase.
   
 
 0.594
A0A1E3Q7K9
Phosphotransferase.
   
 
 0.594
A0A1E3QGF2
Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.
  
  
 
0.515
A0A1E3QD76
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.492
A0A1E3QDI0
NtCtMGAM_N domain-containing protein; Belongs to the glycosyl hydrolase 31 family.
     
 0.441
Your Current Organism:
Lipomyces starkeyi
NCBI taxonomy Id: 675824
Other names: L. starkeyi NRRL Y-11557, Lipomyces starkeyi NRRL Y-11557
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