STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1E3Q3R9Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (351 aa)    
Predicted Functional Partners:
A0A1E3QDC4
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
   
 0.749
A0A1E3Q5P8
Uncharacterized protein.
    
 0.743
A0A1E3Q2H8
MFS domain-containing protein.
 
    
 0.616
A0A1E3PZA0
Uncharacterized protein.
    
 
 0.486
A0A1E3Q8F9
Uncharacterized protein.
    
 
 0.485
A0A1E3Q7S3
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
 
   
 0.458
A0A1E3PY32
Uncharacterized protein.
    
  0.447
A0A1E3QH63
Protein YIP.
    
 
 0.447
A0A1E3Q7J2
Protein kinase domain-containing protein.
    
 
 0.426
A0A1E3QF27
Golgi apparatus membrane protein TVP23; Golgi membrane protein involved in vesicular trafficking. Belongs to the TVP23 family.
   
  
 0.423
Your Current Organism:
Lipomyces starkeyi
NCBI taxonomy Id: 675824
Other names: L. starkeyi NRRL Y-11557, Lipomyces starkeyi NRRL Y-11557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.