STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1E3Q4E8U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (653 aa)    
Predicted Functional Partners:
A0A1E3Q430
Sas10 domain-containing protein.
   
 0.999
A0A1E3Q9D0
Uncharacterized protein.
   
 0.997
A0A1E3PV40
Uncharacterized protein.
   
 
 0.995
A0A1E3Q8B1
U3 small nucleolar RNA-associated protein 22.
   
 0.994
A0A1E3QDZ7
WD_REPEATS_REGION domain-containing protein.
   
 
  0.994
A0A1E3Q1H0
PINc domain-containing protein.
   
 
 0.992
A0A1E3Q721
Uncharacterized protein.
   
 
  0.992
A0A1E3PYL2
CBF domain-containing protein.
   
 0.991
A0A1E3QAA1
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.991
LIPSTDRAFT_469
Uncharacterized protein.
   
 0.991
Your Current Organism:
Lipomyces starkeyi
NCBI taxonomy Id: 675824
Other names: L. starkeyi NRRL Y-11557, Lipomyces starkeyi NRRL Y-11557
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