STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPS140S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (258 aa)    
Predicted Functional Partners:
A0A1E3PUU0
Ribosomal_L2_C domain-containing protein.
   
 
 0.999
A0A1E3PVB2
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 0.999
A0A1E3PVI2
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.999
A0A1E3PW97
Uncharacterized protein.
   
 0.999
A0A1E3PWA0
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.999
A0A1E3PWK9
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.999
A0A1E3PWS2
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
  
 0.999
A0A1E3PYJ1
Uncharacterized protein.
   
 0.999
A0A1E3PYK7
Uncharacterized protein.
   
 0.999
A0A1E3PZ45
Ubiquitin-like domain-containing protein.
   
 0.999
Your Current Organism:
Lipomyces starkeyi
NCBI taxonomy Id: 675824
Other names: L. starkeyi NRRL Y-11557, Lipomyces starkeyi NRRL Y-11557
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