STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1E3Q8P5Uncharacterized protein; Belongs to the peptidase M18 family. (532 aa)    
Predicted Functional Partners:
A0A1E3Q4H5
Autophagy-related protein.
   
 
 0.682
A0A1E3Q4X9
ATG11 domain-containing protein.
    
 
 0.552
A0A1E3Q7S3
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
    
 
 0.511
A0A1E3Q996
Uncharacterized protein.
    
   0.511
A0A1E3Q9E2
Alpha-mann_mid domain-containing protein.
   
 
 0.478
A0A1E3Q7J2
Protein kinase domain-containing protein.
    
 
 0.444
A0A1E3Q9I0
Uncharacterized protein.
    
 
 0.432
A0A1E3Q938
Uncharacterized protein.
   
   0.431
Your Current Organism:
Lipomyces starkeyi
NCBI taxonomy Id: 675824
Other names: L. starkeyi NRRL Y-11557, Lipomyces starkeyi NRRL Y-11557
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