STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1E3QAS5PseudoU_synth_2 domain-containing protein. (291 aa)    
Predicted Functional Partners:
A0A1E3PZ33
TRUD domain-containing protein.
    
 
 0.872
A0A1E3QB25
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.845
A0A1E3QC04
Uncharacterized protein.
   
 
 0.845
A0A1E3Q977
SpoU_methylase domain-containing protein.
  
 
 0.843
A0A1E3QHR9
KOW domain-containing protein.
   
   0.824
A0A1E3Q2K9
EngB-type G domain-containing protein.
   
 
 0.805
A0A1E3Q7T2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.802
A0A1E3PY68
Mitochondrial GTPase 1; Mitochondrial GTPase involved in assembly of the large ribosomal subunit. Plays a role in expression of the mitochondrial translational machinery; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
   
 
 0.800
A0A1E3PWZ3
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.795
A0A1E3Q3K8
Uncharacterized protein.
  
   0.794
Your Current Organism:
Lipomyces starkeyi
NCBI taxonomy Id: 675824
Other names: L. starkeyi NRRL Y-11557, Lipomyces starkeyi NRRL Y-11557
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