STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1E3QC61Uncharacterized protein; Belongs to the argonaute family. (857 aa)    
Predicted Functional Partners:
A0A1E3QC44
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
   
 0.988
A0A1E3QEG9
Uncharacterized protein.
    
 0.947
LIPSTDRAFT_381
Uncharacterized protein.
    
 0.921
A0A1E3PXD8
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.894
A0A1E3PYC8
Uncharacterized protein.
    
 0.894
A0A1E3Q027
Nitroreductase domain-containing protein.
    
 0.894
A0A1E3Q9N9
Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 0.894
A0A1E3QGQ8
Uncharacterized protein.
    
 0.822
A0A1E3QFR5
Uncharacterized protein.
 
      0.816
A0A1E3PV79
Importin N-terminal domain-containing protein.
    
 0.807
Your Current Organism:
Lipomyces starkeyi
NCBI taxonomy Id: 675824
Other names: L. starkeyi NRRL Y-11557, Lipomyces starkeyi NRRL Y-11557
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