Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A1E3PWQ0 | A0A1E3Q0W6 | Uncharacterized protein. | RRM domain-containing protein. | 0.987 |
A0A1E3PWQ0 | A0A1E3Q223 | Uncharacterized protein. | Brix domain-containing protein. | 0.953 |
A0A1E3PWQ0 | A0A1E3Q856 | Uncharacterized protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.961 |
A0A1E3PWQ0 | A0A1E3QB33 | Uncharacterized protein. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.892 |
A0A1E3PWQ0 | A0A1E3QDT1 | Uncharacterized protein. | Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. | 0.893 |
A0A1E3PWQ0 | A0A1E3QE20 | Uncharacterized protein. | Brix domain-containing protein. | 0.943 |
A0A1E3PWQ0 | A0A1E3QFV9 | Uncharacterized protein. | Uncharacterized protein. | 0.863 |
A0A1E3PWQ0 | A0A1E3QHE8 | Uncharacterized protein. | Uncharacterized protein. | 0.967 |
A0A1E3Q0W6 | A0A1E3PWQ0 | RRM domain-containing protein. | Uncharacterized protein. | 0.987 |
A0A1E3Q0W6 | A0A1E3Q223 | RRM domain-containing protein. | Brix domain-containing protein. | 0.996 |
A0A1E3Q0W6 | A0A1E3Q856 | RRM domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.995 |
A0A1E3Q0W6 | A0A1E3QB33 | RRM domain-containing protein. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.962 |
A0A1E3Q0W6 | A0A1E3QDT1 | RRM domain-containing protein. | Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. | 0.889 |
A0A1E3Q0W6 | A0A1E3QE20 | RRM domain-containing protein. | Brix domain-containing protein. | 0.997 |
A0A1E3Q0W6 | A0A1E3QFV9 | RRM domain-containing protein. | Uncharacterized protein. | 0.898 |
A0A1E3Q0W6 | A0A1E3QHE8 | RRM domain-containing protein. | Uncharacterized protein. | 0.996 |
A0A1E3Q223 | A0A1E3PWQ0 | Brix domain-containing protein. | Uncharacterized protein. | 0.953 |
A0A1E3Q223 | A0A1E3Q0W6 | Brix domain-containing protein. | RRM domain-containing protein. | 0.996 |
A0A1E3Q223 | A0A1E3Q856 | Brix domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.994 |
A0A1E3Q223 | A0A1E3QB33 | Brix domain-containing protein. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.951 |
page 1 of 4