STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1E3QEU2Zn(2)-C6 fungal-type domain-containing protein. (1000 aa)    
Predicted Functional Partners:
A0A1E3Q0P5
Uncharacterized protein.
    
 0.792
A0A1E3Q674
Sm domain-containing protein.
    
 0.757
A0A1E3QAD3
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.750
A0A1E3Q211
Small nuclear ribonucleoprotein Sm D2.
    
 0.746
A0A1E3QG72
Small nuclear ribonucleoprotein G.
    
  0.723
A0A1E3QAA7
ERCC4 domain-containing protein.
    
 0.722
A0A1E3Q8J4
DNA polymerase.
    
 0.719
A0A1E3Q830
WD_REPEATS_REGION domain-containing protein.
    
 0.672
A0A1E3Q2E8
ERCC4 domain-containing protein.
    
 0.668
A0A1E3PWA3
Uncharacterized protein.
    
 0.638
Your Current Organism:
Lipomyces starkeyi
NCBI taxonomy Id: 675824
Other names: L. starkeyi NRRL Y-11557, Lipomyces starkeyi NRRL Y-11557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.