STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1E3QEY9PRKCSH domain-containing protein. (540 aa)    
Predicted Functional Partners:
A0A1E3Q719
Uncharacterized protein.
   
 0.996
A0A1E3Q6C1
RING-type domain-containing protein.
   
 0.994
A0A1E3QG66
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.992
A0A1E3QFF7
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.989
A0A1E3QEX2
Uncharacterized protein; Belongs to the AAA ATPase family.
 
  
 0.988
A0A1E3QAC3
UBX domain-containing protein.
    
 
 0.944
A0A1E3Q4W8
Uncharacterized protein; Belongs to the AAA ATPase family.
 
  
 0.941
A0A1E3Q203
Uncharacterized protein.
    
 0.905
A0A1E3Q4A4
Uncharacterized protein.
    
 0.905
A0A1E3QB86
TPR_REGION domain-containing protein.
    
 0.905
Your Current Organism:
Lipomyces starkeyi
NCBI taxonomy Id: 675824
Other names: L. starkeyi NRRL Y-11557, Lipomyces starkeyi NRRL Y-11557
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