STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1E3QFL540S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (87 aa)    
Predicted Functional Partners:
A0A1E3Q7M0
Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.
   
   0.976
A0A1E3PVB2
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.975
A0A1E3Q0P2
Uncharacterized protein.
    
   0.962
A0A1E3QC36
RIO domain-containing protein.
    
   0.962
A0A1E3QFV9
Uncharacterized protein.
    
 
 0.962
A0A1E3Q682
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.956
A0A1E3QGJ9
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
   0.954
A0A1E3Q4P3
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
   
   0.952
A0A1E3PW52
Ribosomal protein L37; Binds to the 23S rRNA.
   
 
 0.943
A0A1E3QER6
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
   0.936
Your Current Organism:
Lipomyces starkeyi
NCBI taxonomy Id: 675824
Other names: L. starkeyi NRRL Y-11557, Lipomyces starkeyi NRRL Y-11557
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.