STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD02951.1dTDP-4-amino-4,6-dideoxygalactose transaminase; Manually curated; Belongs to the DegT/DnrJ/EryC1 family. (398 aa)    
Predicted Functional Partners:
SDE70536.1
dTDP-glucose 4,6-dehydratase.
 
 0.974
SDD03057.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
 
 
 0.961
SDD03003.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid); Manually curated.
  
 0.954
SDE70793.1
UDP-glucose 4-epimerase; Manually curated.
 
 0.921
SDD03508.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.858
SDE70864.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
 
 
 0.836
SDD03138.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
  
 0.807
SDD03096.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
  0.785
SDD80928.1
Predicted oxidoreductase.
   
 
 0.677
aroQ
3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
    
  0.675
Your Current Organism:
Auraticoccus monumenti
NCBI taxonomy Id: 675864
Other names: A. monumenti, Auraticoccus monumenti Alonso-Vega et al. 2011, CECT 7672, DSM 23257, LMG 25551, LMG:25551, Propionibacteriaceae bacterium MON 2.2, strain MON 2.2
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