STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD09631.1Uncharacterized membrane protein YphA, DoxX/SURF4 family. (320 aa)    
Predicted Functional Partners:
SDE60349.1
Hypothetical protein.
  
 
   0.824
SDD09740.1
Hypothetical protein.
 
     0.722
SDD13823.1
LytR cell envelope-related transcriptional attenuator.
  
     0.671
SDD23185.1
Mannosyltransferase (PIG-V).
  
     0.649
SDD70572.1
Alpha-1,6-mannosyltransferase.
  
     0.642
SDD68516.1
RecB family nuclease, putative, TM0106 family.
  
     0.640
SDE59029.1
Protein of unknown function.
  
     0.618
SDE54921.1
Hypothetical protein.
  
 
   0.609
SDE20184.1
Hypothetical protein.
  
     0.598
SDD68673.1
Hypothetical protein.
  
     0.588
Your Current Organism:
Auraticoccus monumenti
NCBI taxonomy Id: 675864
Other names: A. monumenti, Auraticoccus monumenti Alonso-Vega et al. 2011, CECT 7672, DSM 23257, LMG 25551, LMG:25551, Propionibacteriaceae bacterium MON 2.2, strain MON 2.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.