STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD11854.1SnoaL-like polyketide cyclase. (326 aa)    
Predicted Functional Partners:
SDD11754.1
Pimeloyl-ACP methyl ester carboxylesterase.
     0.962
SDD11818.1
Hypothetical protein.
 
     0.930
SDD12431.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
     0.755
SDD11789.1
Predicted amidohydrolase.
 
  
  0.728
SDD11903.1
Transcriptional regulator, LacI family.
 
     0.657
hisD
Sulfopropanediol 3-dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
 
     0.637
SDD12391.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
     0.634
SDD99801.1
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
  
     0.628
SDD12347.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
     0.588
SDD12024.1
4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family.
 
    0.586
Your Current Organism:
Auraticoccus monumenti
NCBI taxonomy Id: 675864
Other names: A. monumenti, Auraticoccus monumenti Alonso-Vega et al. 2011, CECT 7672, DSM 23257, LMG 25551, LMG:25551, Propionibacteriaceae bacterium MON 2.2, strain MON 2.2
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