STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD16807.1Type VII secretion integral membrane protein EccD. (458 aa)    
Predicted Functional Partners:
SDD16758.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
 
 
 0.998
SDD16960.1
Type VII secretion protein EccB.
 
 
 
 0.905
SDD16915.1
Type VII secretion protein EccE.
 
   
 0.830
SDD17096.1
Hypothetical protein.
  
 
   0.812
SDD65559.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
 0.745
SDE40678.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
 0.745
SDE58458.1
Hypothetical protein.
  
     0.698
SDD16715.1
Subtilase family protein.
 
  
 0.617
SDD15546.1
Hypothetical protein.
  
 
   0.558
SDD50448.1
MinD-like ATPase involved in chromosome partitioning or flagellar assembly.
 
    0.539
Your Current Organism:
Auraticoccus monumenti
NCBI taxonomy Id: 675864
Other names: A. monumenti, Auraticoccus monumenti Alonso-Vega et al. 2011, CECT 7672, DSM 23257, LMG 25551, LMG:25551, Propionibacteriaceae bacterium MON 2.2, strain MON 2.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.