STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD36839.1Integral membrane protein. (118 aa)    
Predicted Functional Partners:
SDE08871.1
CopC domain-containing protein.
   
    0.742
SDE55301.1
Cytochrome c oxidase subunit IV.
  
     0.704
SDD04420.1
Cytochrome c biogenesis protein.
  
     0.695
SDE55106.1
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor.
  
     0.694
SDD76476.1
Putative copper resistance protein D.
  
     0.679
SDE55133.1
Menaquinol-cytochrome c reductase iron-sulfur subunit precursor.
  
     0.652
SDD36891.1
BadF-type ATPase.
       0.620
SDE06241.1
Protein of unknown function.
  
     0.592
SDD60143.1
Protein of unknown function.
  
     0.578
SDE55158.1
Menaquinol-cytochrome c reductase cytochrome b subunit precursor.
  
     0.552
Your Current Organism:
Auraticoccus monumenti
NCBI taxonomy Id: 675864
Other names: A. monumenti, Auraticoccus monumenti Alonso-Vega et al. 2011, CECT 7672, DSM 23257, LMG 25551, LMG:25551, Propionibacteriaceae bacterium MON 2.2, strain MON 2.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.