STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD39614.1Sugar phosphate isomerase/epimerase. (311 aa)    
Predicted Functional Partners:
SDD39558.1
3-hydroxyacyl-CoA dehydrogenase.
 
     0.920
SDD39513.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
     0.884
SDD39804.1
Homodimeric dihydroxyacetone kinase.
     0.837
SDE01419.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
     0.653
SDD39466.1
Uncharacterized conserved protein YgbK, DUF1537 family.
 
     0.644
SDD39755.1
Triosephosphate isomerase.
 
     0.612
SDE60511.1
Para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase.
    
  0.598
SDD39706.1
DNA-binding transcriptional regulator, GntR family.
  
     0.597
xylB
Xylulokinase.
   
 
  0.556
xylB-2
Xylulokinase.
   
 
  0.556
Your Current Organism:
Auraticoccus monumenti
NCBI taxonomy Id: 675864
Other names: A. monumenti, Auraticoccus monumenti Alonso-Vega et al. 2011, CECT 7672, DSM 23257, LMG 25551, LMG:25551, Propionibacteriaceae bacterium MON 2.2, strain MON 2.2
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