STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD41789.1Hypothetical protein. (108 aa)    
Predicted Functional Partners:
SDD41743.1
Hypothetical protein.
       0.773
SDD41855.1
DNA binding domain-containing protein, excisionase family.
       0.773
SDD41906.1
Hypothetical protein.
       0.541
SDD41956.1
Hypothetical protein.
       0.461
SDD42014.1
Hypothetical protein.
      
0.461
SDD42063.1
Protein of unknown function.
       0.461
SDD42132.1
Hypothetical protein.
       0.461
SDD42174.1
Hypothetical protein.
       0.461
SDD42216.1
Hypothetical protein.
       0.461
SDD42255.1
Hypothetical protein.
       0.461
Your Current Organism:
Auraticoccus monumenti
NCBI taxonomy Id: 675864
Other names: A. monumenti, Auraticoccus monumenti Alonso-Vega et al. 2011, CECT 7672, DSM 23257, LMG 25551, LMG:25551, Propionibacteriaceae bacterium MON 2.2, strain MON 2.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.