STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD44129.1LysM domain-containing protein. (1071 aa)    
Predicted Functional Partners:
SDD44075.1
TadE-like protein.
 
     0.956
SDD43866.1
Flp pilus assembly protein TadB.
 
     0.910
SDD43923.1
Hypothetical protein.
 
     0.905
SDD44020.1
TadE-like protein.
       0.806
SDD39848.1
Hypothetical protein.
 
     0.803
SDD43972.1
Hypothetical protein.
       0.802
SDD39905.1
Hypothetical protein.
 
     0.790
SDD13823.1
LytR cell envelope-related transcriptional attenuator.
  
     0.766
SDD25110.1
Hypothetical protein.
 
     0.766
SDD09740.1
Hypothetical protein.
  
     0.764
Your Current Organism:
Auraticoccus monumenti
NCBI taxonomy Id: 675864
Other names: A. monumenti, Auraticoccus monumenti Alonso-Vega et al. 2011, CECT 7672, DSM 23257, LMG 25551, LMG:25551, Propionibacteriaceae bacterium MON 2.2, strain MON 2.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.