STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD44578.1Raffinose/stachyose/melibiose transport system substrate-binding protein. (436 aa)    
Predicted Functional Partners:
SDD44634.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.982
SDD44689.1
Raffinose/stachyose/melibiose transport system permease protein.
 
  0.980
SDE03417.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
   
  0.844
SDD92616.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
   
  0.795
SDD15015.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
   
  0.675
SDD47115.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
   
  0.675
SDE49384.1
Alpha-1,4-digalacturonate transport system permease protein.
  
 0.648
SDD26809.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.630
SDD74666.1
Cellobiose ABC transporter membrane protein.
  
  0.630
SDD58483.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
   
  0.606
Your Current Organism:
Auraticoccus monumenti
NCBI taxonomy Id: 675864
Other names: A. monumenti, Auraticoccus monumenti Alonso-Vega et al. 2011, CECT 7672, DSM 23257, LMG 25551, LMG:25551, Propionibacteriaceae bacterium MON 2.2, strain MON 2.2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.