STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD49191.1Serine/threonine-protein kinase HipA. (409 aa)    
Predicted Functional Partners:
SDD49227.1
Transcriptional regulator, y4mF family.
 
     0.956
SDD49149.1
Pentapeptide repeat-containing protein.
 
     0.646
SDE28490.1
UDP-N-acetylglucosamine 1-carboxyvinyltransferase.
  
 
 0.641
SDD84116.1
Cupin domain-containing protein.
  
 
 0.602
SDD31178.1
DNA-binding transcriptional regulator, XRE-family HTH domain.
  
 
 0.578
SDD12274.1
Helix-turn-helix domain-containing protein.
  
   0.576
SDD22224.1
Helix-turn-helix domain-containing protein.
  
   0.576
SDD24879.1
Helix-turn-helix domain-containing protein.
  
   0.576
SDD28931.1
Helix-turn-helix domain-containing protein.
  
   0.576
SDD65031.1
Helix-turn-helix domain-containing protein; Manually curated.
  
   0.576
Your Current Organism:
Auraticoccus monumenti
NCBI taxonomy Id: 675864
Other names: A. monumenti, Auraticoccus monumenti Alonso-Vega et al. 2011, CECT 7672, DSM 23257, LMG 25551, LMG:25551, Propionibacteriaceae bacterium MON 2.2, strain MON 2.2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.