STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD51830.1DNA-binding transcriptional regulator, GntR family. (248 aa)    
Predicted Functional Partners:
SDE15891.1
DNA-binding transcriptional regulator, FadR family.
  
  
 0.783
SDE30640.1
DNA-binding transcriptional regulator, FadR family.
  
  
 0.783
SDD94503.1
Transcriptional regulator, GntR family.
  
  
 0.782
SDD39706.1
DNA-binding transcriptional regulator, GntR family.
  
     0.774
SDD82894.1
DNA-binding transcriptional regulator, FadR family.
  
  
 0.770
SDE11543.1
DNA-binding transcriptional regulator, FadR family.
  
  
 0.769
SDE56665.1
DNA-binding transcriptional regulator, FadR family.
  
  
 0.660
SDD51792.1
NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase.
 
    0.566
SDD51474.1
Regulator of RNase E activity RraA.
 
     0.529
SDD51723.1
Multiple sugar transport system permease protein.
       0.492
Your Current Organism:
Auraticoccus monumenti
NCBI taxonomy Id: 675864
Other names: A. monumenti, Auraticoccus monumenti Alonso-Vega et al. 2011, CECT 7672, DSM 23257, LMG 25551, LMG:25551, Propionibacteriaceae bacterium MON 2.2, strain MON 2.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.