STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD53267.1Cell wall-active antibiotics response 4TMS YvqF. (258 aa)    
Predicted Functional Partners:
SDE55572.1
Phage shock protein A (PspA) family protein.
 
  
 0.775
SDD53178.1
Putative membrane protein.
       0.762
SDD53223.1
Hypothetical protein.
       0.762
SDD78957.1
Signal transduction histidine kinase.
 
    0.723
SDE55547.1
Hypothetical protein.
  
     0.704
SDD81972.1
Hypothetical protein.
  
     0.648
SDE44204.1
Hypothetical protein.
  
     0.616
SDD10318.1
Tight adherence protein B.
  
     0.553
SDE52339.1
DivIVA domain-containing protein.
  
     0.545
SDD14299.1
Putative tRNA adenosine deaminase-associated protein.
  
     0.522
Your Current Organism:
Auraticoccus monumenti
NCBI taxonomy Id: 675864
Other names: A. monumenti, Auraticoccus monumenti Alonso-Vega et al. 2011, CECT 7672, DSM 23257, LMG 25551, LMG:25551, Propionibacteriaceae bacterium MON 2.2, strain MON 2.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.