STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD83445.1decaprenylphospho-beta-D-ribofuranose 2-oxidase. (465 aa)    
Predicted Functional Partners:
SDD83412.1
decaprenylphospho-beta-D-erythro-pentofuranosid- 2-ulose 2-reductase.
     0.964
SDD83482.1
Decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family.
 
  
 0.950
SDE22144.1
Glutamate synthase (NADH) large subunit.
    
 0.757
SDD83826.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
 
     0.730
SDD82800.1
L-lactate dehydrogenase (cytochrome).
  
 0.653
SDE21033.1
Electron transfer flavoprotein beta subunit.
  
 
 0.626
SDE21055.1
Electron transfer flavoprotein alpha subunit apoprotein.
  
 
 0.626
nuoI
NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
   
  0.486
SDD83362.1
UDPglucose 6-dehydrogenase.
       0.483
SDD83526.1
Hypothetical protein.
       0.467
Your Current Organism:
Auraticoccus monumenti
NCBI taxonomy Id: 675864
Other names: A. monumenti, Auraticoccus monumenti Alonso-Vega et al. 2011, CECT 7672, DSM 23257, LMG 25551, LMG:25551, Propionibacteriaceae bacterium MON 2.2, strain MON 2.2
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