STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD97348.1Zinicin-like metallopeptidase. (131 aa)    
Predicted Functional Partners:
SDD89107.1
Protein of unknown function.
  
     0.730
SDD97507.1
Phospho-glucose isomerase C-terminal SIS domain-containing protein.
 
     0.719
SDD97391.1
Protein of unknown function; Manually curated.
       0.625
SDD97428.1
Phosphomannomutase.
       0.617
SDD97464.1
Hypothetical protein; Belongs to the UPF0434 family.
       0.617
SDE59718.1
DNA-binding transcriptional regulator, PucR family.
  
     0.573
SDD90605.1
Hypothetical protein.
  
     0.569
SDD26199.1
Protein of unknown function.
      
 0.565
SDE59478.1
Protein of unknown function.
  
     0.549
SDD13823.1
LytR cell envelope-related transcriptional attenuator.
  
     0.536
Your Current Organism:
Auraticoccus monumenti
NCBI taxonomy Id: 675864
Other names: A. monumenti, Auraticoccus monumenti Alonso-Vega et al. 2011, CECT 7672, DSM 23257, LMG 25551, LMG:25551, Propionibacteriaceae bacterium MON 2.2, strain MON 2.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.