STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE01384.1Putative sensory transduction regulator; Manually curated. (335 aa)    
Predicted Functional Partners:
SDD10414.1
Fic/DOC family protein.
  
     0.771
SDD11278.1
Anion-transporting ATPase, ArsA/GET3 family.
  
     0.757
SDD51036.1
Hypothetical protein.
  
     0.748
SDE54514.1
Ribosome association toxin PasT (RatA) of the RatAB toxin-antitoxin module.
  
     0.744
SDD11314.1
Anion-transporting ATPase, ArsA/GET3 family.
  
     0.740
SDD05831.1
UDP-glucose 4-epimerase.
  
     0.692
SDE69561.1
Helix-turn-helix.
  
     0.686
SDD77295.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.658
SDE41014.1
2-phospho-L-lactate guanylyltransferase.
  
     0.654
SDD05793.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
     0.653
Your Current Organism:
Auraticoccus monumenti
NCBI taxonomy Id: 675864
Other names: A. monumenti, Auraticoccus monumenti Alonso-Vega et al. 2011, CECT 7672, DSM 23257, LMG 25551, LMG:25551, Propionibacteriaceae bacterium MON 2.2, strain MON 2.2
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