STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE08669.1Hydroxyneurosporene synthase (CrtC). (369 aa)    
Predicted Functional Partners:
SDE21197.1
Putative ABC transport system permease protein.
 
    0.757
SDD60516.1
Hypothetical protein.
  
     0.683
SDE32246.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.599
SDE08712.1
RNA polymerase sigma-70 factor, ECF subfamily.
       0.572
SDE60572.1
Hypothetical protein.
  
     0.563
SDE43403.1
Calcineurin-like phosphoesterase.
  
     0.527
SDE29952.1
Predicted dehydrogenase.
  
     0.524
SDE08752.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
 
     0.507
SDE08630.1
Alkylhydroperoxidase AhpD family core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.472
SDD92405.1
Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family.
 
     0.471
Your Current Organism:
Auraticoccus monumenti
NCBI taxonomy Id: 675864
Other names: A. monumenti, Auraticoccus monumenti Alonso-Vega et al. 2011, CECT 7672, DSM 23257, LMG 25551, LMG:25551, Propionibacteriaceae bacterium MON 2.2, strain MON 2.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.