STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE09513.1Hypothetical protein. (94 aa)    
Predicted Functional Partners:
SDE24564.1
Peptidase_C39 like family protein.
  
 0.911
SDD89144.1
Spore photoproduct lyase family protein.
 
     0.720
SDD35655.1
Putative zinc-finger.
   
 
 0.714
SDD86264.1
Right handed beta helix region.
   
   0.707
SDD25584.1
Hypothetical protein.
  
 
 0.695
SDD82467.1
Hypothetical protein.
   
 
 0.661
SDE32952.1
Hypothetical protein.
  
  
 0.643
SDD15585.1
Hypothetical protein.
 
     0.623
SDD35015.1
Protein of unknown function.
  
     0.612
SDE09477.1
Pyridoxamine 5'-phosphate oxidase.
       0.603
Your Current Organism:
Auraticoccus monumenti
NCBI taxonomy Id: 675864
Other names: A. monumenti, Auraticoccus monumenti Alonso-Vega et al. 2011, CECT 7672, DSM 23257, LMG 25551, LMG:25551, Propionibacteriaceae bacterium MON 2.2, strain MON 2.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.