STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE11543.1DNA-binding transcriptional regulator, FadR family. (234 aa)    
Predicted Functional Partners:
SDE37663.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.775
SDE68764.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.775
SDD51830.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.769
SDD39706.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.759
SDD65472.1
GntR family transcriptional regulator; Manually curated.
  
    0.643
SDE11630.1
D-threo-aldose 1-dehydrogenase.
 
     0.596
SDE11588.1
L-fuconolactonase.
 
     0.592
SDD59995.1
Transcriptional regulator, GntR family.
  
    0.548
SDD33493.1
Transcriptional regulator, GntR family.
  
    0.530
SDE11718.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
 
  0.512
Your Current Organism:
Auraticoccus monumenti
NCBI taxonomy Id: 675864
Other names: A. monumenti, Auraticoccus monumenti Alonso-Vega et al. 2011, CECT 7672, DSM 23257, LMG 25551, LMG:25551, Propionibacteriaceae bacterium MON 2.2, strain MON 2.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.