STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE19253.1Gluconolactonase. (306 aa)    
Predicted Functional Partners:
SDE19287.1
Hypothetical protein.
 
     0.801
SDD30196.1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
 
      0.796
xylB-2
Xylulokinase.
  
 
  0.700
SDE46892.1
Gluconokinase.
    
  0.700
SDD81071.1
Predicted dehydrogenase.
  
 
 0.665
SDD30045.1
Aldo/keto reductase.
   
 
  0.661
SDD52978.1
2,5-diketo-D-gluconate reductase A.
   
 
  0.661
SDE01591.1
Aldo/keto reductase.
   
 
  0.661
SDE19315.1
tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family; Belongs to the SUA5 family.
       0.546
SDE19353.1
UDP-GlcNAc:undecaprenyl-phosphate GlcNAc-1-phosphate transferase.
       0.546
Your Current Organism:
Auraticoccus monumenti
NCBI taxonomy Id: 675864
Other names: A. monumenti, Auraticoccus monumenti Alonso-Vega et al. 2011, CECT 7672, DSM 23257, LMG 25551, LMG:25551, Propionibacteriaceae bacterium MON 2.2, strain MON 2.2
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