STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE22790.1Hypothetical protein. (325 aa)    
Predicted Functional Partners:
SDE22756.1
N-acetylneuraminate synthase.
 
   
 0.928
SDE20409.1
N-acylneuraminate cytidylyltransferase.
 
   
 0.908
SDE20380.1
Hypothetical protein.
 
   
 0.888
SDE65811.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.773
SDE65721.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.766
hisA
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.
       0.565
SDE22851.1
HAD-superfamily subfamily IB hydrolase, TIGR01490.
       0.565
SDD74324.1
CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase.
  
     0.495
SDE46643.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.495
SDE46557.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.486
Your Current Organism:
Auraticoccus monumenti
NCBI taxonomy Id: 675864
Other names: A. monumenti, Auraticoccus monumenti Alonso-Vega et al. 2011, CECT 7672, DSM 23257, LMG 25551, LMG:25551, Propionibacteriaceae bacterium MON 2.2, strain MON 2.2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.