STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE43145.1Peptide/nickel transport system permease protein. (328 aa)    
Predicted Functional Partners:
SDE43093.1
Peptide/nickel transport system permease protein.
 
 0.967
SDE43058.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.948
SDE43180.1
Peptide/nickel transport system substrate-binding protein.
 
  0.922
SDE43017.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.916
SDE05333.1
Peptide/nickel transport system substrate-binding protein.
  0.875
SDE05413.1
Peptide/nickel transport system permease protein.
 
 
 0.858
SDD48238.1
Oligopeptide transport system permease protein.
 
 
 0.854
SDD59623.1
Peptide/nickel transport system permease protein.
 
 
 0.853
SDD33720.1
Peptide/nickel transport system permease protein.
 
 
 0.848
SDE37984.1
Peptide/nickel transport system permease protein.
 
 
 0.848
Your Current Organism:
Auraticoccus monumenti
NCBI taxonomy Id: 675864
Other names: A. monumenti, Auraticoccus monumenti Alonso-Vega et al. 2011, CECT 7672, DSM 23257, LMG 25551, LMG:25551, Propionibacteriaceae bacterium MON 2.2, strain MON 2.2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.