Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE47925.1 | SDE48056.1 | SAMN04489747_3523 | SAMN04489747_3526 | Hypothetical protein. | Protein of unknown function. | 0.525 |
SDE47925.1 | nusA | SAMN04489747_3523 | SAMN04489747_3524 | Hypothetical protein. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.949 |
SDE47925.1 | rimP | SAMN04489747_3523 | SAMN04489747_3525 | Hypothetical protein. | Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.956 |
SDE48056.1 | SDE47925.1 | SAMN04489747_3526 | SAMN04489747_3523 | Protein of unknown function. | Hypothetical protein. | 0.525 |
SDE48056.1 | nusA | SAMN04489747_3526 | SAMN04489747_3524 | Protein of unknown function. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.572 |
SDE48056.1 | rimP | SAMN04489747_3526 | SAMN04489747_3525 | Protein of unknown function. | Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.572 |
nusA | SDE47925.1 | SAMN04489747_3524 | SAMN04489747_3523 | NusA antitermination factor; Participates in both transcription termination and antitermination. | Hypothetical protein. | 0.949 |
nusA | SDE48056.1 | SAMN04489747_3524 | SAMN04489747_3526 | NusA antitermination factor; Participates in both transcription termination and antitermination. | Protein of unknown function. | 0.572 |
nusA | rimP | SAMN04489747_3524 | SAMN04489747_3525 | NusA antitermination factor; Participates in both transcription termination and antitermination. | Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.957 |
rimP | SDE47925.1 | SAMN04489747_3525 | SAMN04489747_3523 | Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | Hypothetical protein. | 0.956 |
rimP | SDE48056.1 | SAMN04489747_3525 | SAMN04489747_3526 | Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | Protein of unknown function. | 0.572 |
rimP | nusA | SAMN04489747_3525 | SAMN04489747_3524 | Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.957 |