Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001952955_01416 | GCA_001952955_01964 | GCA_001952955_01416 | GCA_001952955_01964 | Unannotated protein. | Unannotated protein. | 0.862 |
GCA_001952955_01416 | GCA_001952955_01965 | GCA_001952955_01416 | GCA_001952955_01965 | Unannotated protein. | Unannotated protein. | 0.843 |
GCA_001952955_01416 | GCA_001952955_01966 | GCA_001952955_01416 | GCA_001952955_01966 | Unannotated protein. | Unannotated protein. | 0.843 |
GCA_001952955_01416 | rnfA | GCA_001952955_01416 | GCA_001952955_01962 | Unannotated protein. | Unannotated protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.850 |
GCA_001952955_01416 | rnfE | GCA_001952955_01416 | GCA_001952955_01967 | Unannotated protein. | Unannotated protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.843 |
GCA_001952955_01964 | GCA_001952955_01416 | GCA_001952955_01964 | GCA_001952955_01416 | Unannotated protein. | Unannotated protein. | 0.862 |
GCA_001952955_01964 | GCA_001952955_01965 | GCA_001952955_01964 | GCA_001952955_01965 | Unannotated protein. | Unannotated protein. | 0.998 |
GCA_001952955_01964 | GCA_001952955_01966 | GCA_001952955_01964 | GCA_001952955_01966 | Unannotated protein. | Unannotated protein. | 0.998 |
GCA_001952955_01964 | VFL11327_00001 | GCA_001952955_01964 | GCA_001952955_02220 | Unannotated protein. | Unannotated protein. | 0.838 |
GCA_001952955_01964 | apbE | GCA_001952955_01964 | GCA_001952955_00548 | Unannotated protein. | Unannotated protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 0.588 |
GCA_001952955_01964 | nqrD | GCA_001952955_01964 | GCA_001952955_00545 | Unannotated protein. | Unannotated protein; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family. | 0.581 |
GCA_001952955_01964 | nqrE | GCA_001952955_01964 | GCA_001952955_00546 | Unannotated protein. | Unannotated protein; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family. | 0.694 |
GCA_001952955_01964 | rnfA | GCA_001952955_01964 | GCA_001952955_01962 | Unannotated protein. | Unannotated protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.994 |
GCA_001952955_01964 | rnfB | GCA_001952955_01964 | GCA_001952955_01963 | Unannotated protein. | Unannotated protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.998 |
GCA_001952955_01964 | rnfE | GCA_001952955_01964 | GCA_001952955_01967 | Unannotated protein. | Unannotated protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.998 |
GCA_001952955_01965 | GCA_001952955_01416 | GCA_001952955_01965 | GCA_001952955_01416 | Unannotated protein. | Unannotated protein. | 0.843 |
GCA_001952955_01965 | GCA_001952955_01964 | GCA_001952955_01965 | GCA_001952955_01964 | Unannotated protein. | Unannotated protein. | 0.998 |
GCA_001952955_01965 | GCA_001952955_01966 | GCA_001952955_01965 | GCA_001952955_01966 | Unannotated protein. | Unannotated protein. | 0.998 |
GCA_001952955_01965 | VFL11327_00001 | GCA_001952955_01965 | GCA_001952955_02220 | Unannotated protein. | Unannotated protein. | 0.838 |
GCA_001952955_01965 | apbE | GCA_001952955_01965 | GCA_001952955_00548 | Unannotated protein. | Unannotated protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 0.815 |
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