Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001952955_00336 | GCA_001952955_01399 | GCA_001952955_00336 | GCA_001952955_01399 | Unannotated protein. | Unannotated protein. | 0.712 |
GCA_001952955_00336 | GCA_001952955_03092 | GCA_001952955_00336 | GCA_001952955_03092 | Unannotated protein. | Unannotated protein. | 0.668 |
GCA_001952955_00336 | UbiF | GCA_001952955_00336 | GCA_001952955_02015 | Unannotated protein. | Unannotated protein. | 0.730 |
GCA_001952955_00336 | VFL11327_03727 | GCA_001952955_00336 | GCA_001952955_02899 | Unannotated protein. | Unannotated protein. | 0.743 |
GCA_001952955_00336 | VFL11327_03977 | GCA_001952955_00336 | GCA_001952955_02763 | Unannotated protein. | Unannotated protein. | 0.708 |
GCA_001952955_00336 | hemF | GCA_001952955_00336 | GCA_001952955_02776 | Unannotated protein. | Unannotated protein; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX. | 0.560 |
GCA_001952955_00336 | ubiA | GCA_001952955_00336 | GCA_001952955_02954 | Unannotated protein. | Unannotated protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.861 |
GCA_001952955_00336 | ubiE_2 | GCA_001952955_00336 | GCA_001952955_02898 | Unannotated protein. | Unannotated protein; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | 0.965 |
GCA_001952955_00336 | ubiG_1 | GCA_001952955_00336 | GCA_001952955_01285 | Unannotated protein. | Unannotated protein; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. | 0.987 |
GCA_001952955_00336 | ubiI | GCA_001952955_00336 | GCA_001952955_00337 | Unannotated protein. | Unannotated protein. | 0.934 |
GCA_001952955_01399 | GCA_001952955_00336 | GCA_001952955_01399 | GCA_001952955_00336 | Unannotated protein. | Unannotated protein. | 0.712 |
GCA_001952955_01399 | GCA_001952955_03092 | GCA_001952955_01399 | GCA_001952955_03092 | Unannotated protein. | Unannotated protein. | 0.523 |
GCA_001952955_01399 | UbiF | GCA_001952955_01399 | GCA_001952955_02015 | Unannotated protein. | Unannotated protein. | 0.675 |
GCA_001952955_01399 | hemF | GCA_001952955_01399 | GCA_001952955_02776 | Unannotated protein. | Unannotated protein; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX. | 0.425 |
GCA_001952955_01399 | ubiI | GCA_001952955_01399 | GCA_001952955_00337 | Unannotated protein. | Unannotated protein. | 0.716 |
GCA_001952955_03092 | GCA_001952955_00336 | GCA_001952955_03092 | GCA_001952955_00336 | Unannotated protein. | Unannotated protein. | 0.668 |
GCA_001952955_03092 | GCA_001952955_01399 | GCA_001952955_03092 | GCA_001952955_01399 | Unannotated protein. | Unannotated protein. | 0.523 |
GCA_001952955_03092 | UbiF | GCA_001952955_03092 | GCA_001952955_02015 | Unannotated protein. | Unannotated protein. | 0.710 |
GCA_001952955_03092 | ubiI | GCA_001952955_03092 | GCA_001952955_00337 | Unannotated protein. | Unannotated protein. | 0.714 |
UbiF | GCA_001952955_00336 | GCA_001952955_02015 | GCA_001952955_00336 | Unannotated protein. | Unannotated protein. | 0.730 |
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