Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CobA | CobA-2 | GCA_001952955_00221 | GCA_001952955_01104 | Unannotated protein. | Unannotated protein. | 0.909 |
CobA | GCA_001952955_01532 | GCA_001952955_00221 | GCA_001952955_01532 | Unannotated protein. | Unannotated protein. | 0.992 |
CobA | GCA_001952955_02915 | GCA_001952955_00221 | GCA_001952955_02915 | Unannotated protein. | Unannotated protein. | 0.902 |
CobA | GCA_001952955_02916 | GCA_001952955_00221 | GCA_001952955_02916 | Unannotated protein. | Unannotated protein. | 0.929 |
CobA | cysG_2 | GCA_001952955_00221 | GCA_001952955_03048 | Unannotated protein. | Unannotated protein; Belongs to the precorrin methyltransferase family. | 0.903 |
CobA | hemC | GCA_001952955_00221 | GCA_001952955_02917 | Unannotated protein. | Unannotated protein; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.967 |
CobA | hemE | GCA_001952955_00221 | GCA_001952955_02606 | Unannotated protein. | Unannotated protein; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.927 |
CobA-2 | CobA | GCA_001952955_01104 | GCA_001952955_00221 | Unannotated protein. | Unannotated protein. | 0.909 |
CobA-2 | GCA_001952955_01532 | GCA_001952955_01104 | GCA_001952955_01532 | Unannotated protein. | Unannotated protein. | 0.992 |
CobA-2 | GCA_001952955_02915 | GCA_001952955_01104 | GCA_001952955_02915 | Unannotated protein. | Unannotated protein. | 0.902 |
CobA-2 | GCA_001952955_02916 | GCA_001952955_01104 | GCA_001952955_02916 | Unannotated protein. | Unannotated protein. | 0.929 |
CobA-2 | cysG_2 | GCA_001952955_01104 | GCA_001952955_03048 | Unannotated protein. | Unannotated protein; Belongs to the precorrin methyltransferase family. | 0.905 |
CobA-2 | hemC | GCA_001952955_01104 | GCA_001952955_02917 | Unannotated protein. | Unannotated protein; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.974 |
CobA-2 | hemE | GCA_001952955_01104 | GCA_001952955_02606 | Unannotated protein. | Unannotated protein; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.927 |
GCA_001952955_00674 | GCA_001952955_02914 | GCA_001952955_00674 | GCA_001952955_02914 | Unannotated protein. | Unannotated protein. | 0.546 |
GCA_001952955_00674 | GCA_001952955_02915 | GCA_001952955_00674 | GCA_001952955_02915 | Unannotated protein. | Unannotated protein. | 0.621 |
GCA_001952955_01532 | CobA | GCA_001952955_01532 | GCA_001952955_00221 | Unannotated protein. | Unannotated protein. | 0.992 |
GCA_001952955_01532 | CobA-2 | GCA_001952955_01532 | GCA_001952955_01104 | Unannotated protein. | Unannotated protein. | 0.992 |
GCA_001952955_01532 | GCA_001952955_02915 | GCA_001952955_01532 | GCA_001952955_02915 | Unannotated protein. | Unannotated protein. | 0.900 |
GCA_001952955_01532 | GCA_001952955_02916 | GCA_001952955_01532 | GCA_001952955_02916 | Unannotated protein. | Unannotated protein. | 0.425 |
page 1 of 4