STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001952955_03813Unannotated protein. (404 aa)    
Predicted Functional Partners:
AstB
Unannotated protein.
 
 
 0.988
argC
Unannotated protein; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
 
 
 0.977
AstD
Unannotated protein.
 
 0.976
argB
Unannotated protein; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
 
  
 0.960
argH
Unannotated protein; In the N-terminal section; belongs to the lyase 1 family. Argininosuccinate lyase subfamily.
 
  
 0.944
astD
Unannotated protein; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
 
 0.933
GCA_001952955_03812
Unannotated protein.
 
  
 0.933
argG_2
Unannotated protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
 
 
 0.929
argA
Unannotated protein.
 
  
 0.915
GCA_001952955_03811
Unannotated protein.
 
  
 0.897
Your Current Organism:
Vibrio fluvialis
NCBI taxonomy Id: 676
Other names: ATCC 33809, CAIM 593, CCUG 13622, CCUG 20252, CIP 103355, DSM 19283, JCM 3752, LMG 7894, LMG:7894, NBRC 103150, NCCB 81034, NCTC 11327, V. fluvialis, strain VL 5125
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.