STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001952955_03979Unannotated protein. (338 aa)    
Predicted Functional Partners:
GCA_001952955_03978
Unannotated protein.
 
   
 0.957
GCA_001952955_03976
Unannotated protein.
 
     0.893
GCA_001952955_03977
Unannotated protein.
 
     0.893
GCA_001952955_03975
Unannotated protein.
 
     0.892
GCA_001952955_03974
Unannotated protein.
 
     0.858
GCA_001952955_03963
Unannotated protein.
 
     0.834
GCA_001952955_03961
Unannotated protein.
 
    0.833
GCA_001952955_04290
Unannotated protein.
  
   0.818
GCA_001952955_03955
Unannotated protein.
 
    0.815
GCA_001952955_04379
Unannotated protein.
 
   
 0.803
Your Current Organism:
Vibrio fluvialis
NCBI taxonomy Id: 676
Other names: ATCC 33809, CAIM 593, CCUG 13622, CCUG 20252, CIP 103355, DSM 19283, JCM 3752, LMG 7894, LMG:7894, NBRC 103150, NCCB 81034, NCTC 11327, V. fluvialis, strain VL 5125
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.