Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEE26310.1Hypothetical protein. (324 aa)    
Predicted Functional Partners:
AEE26311.1
Hypothetical protein.
  
  
 0.987
AEE26312.1
Phage-related baseplate assembly protein; COG3948.
  
  
 0.985
AEE26313.1
Hypothetical protein.
  
  
 0.982
AEE26316.1
Terminase large subunit.
  
  
 0.980
AEE26296.1
Hypothetical protein.
  
  
 0.974
AEE26290.1
Phage-related tail protein.
  
  
 0.958
AEE26300.1
Baseplate assembly protein V.
  
  
 0.957
AEE26291.1
Hypothetical protein.
  
    0.952
AEE26295.1
Phage major tail tube protein.
  
  
 0.898
AEE26308.1
Hypothetical protein.
       0.848
Your Current Organism:
Francisella tularensis novicida
NCBI taxonomy Id: 676032
Other names: F. cf. tularensis subsp. novicida 3523, Francisella cf. novicida 3523, Francisella cf. tularensis subsp. novicida 3523, Francisella sp. 3523
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