STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000975115_00616Unannotated protein. (494 aa)    
Predicted Functional Partners:
GCA_000975115_00801
Unannotated protein.
    
  0.804
GCA_000975115_01436
Unannotated protein.
 
  
 0.690
GCA_000975115_00940
Unannotated protein.
  
 
 0.688
GCA_000975115_01435
Unannotated protein.
 
  
 0.624
GCA_000975115_00617
Unannotated protein.
       0.584
GCA_000975115_00437
Unannotated protein.
    
 0.536
GCA_000975115_02109
Unannotated protein.
  
  
 0.532
GCA_000975115_00614
Unannotated protein.
  
  
  0.508
GCA_000975115_01122
Unannotated protein.
   
 
 0.493
GCA_000975115_01540
Unannotated protein.
 
 
 
 0.493
Your Current Organism:
Demequina oxidasica
NCBI taxonomy Id: 676199
Other names: D. oxidasica, Demequina oxidasica Ue et al. 2011, KCTC 19746, MBIC 08346, NBRC 106264
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.