STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000975115_01137Unannotated protein. (197 aa)    
Predicted Functional Partners:
GCA_000975115_00992
Unannotated protein.
     
 0.938
GCA_000975115_01176
Unannotated protein.
 
  
 0.923
GCA_000975115_01135
Unannotated protein.
  
    0.886
GCA_000975115_00208
Unannotated protein.
  
  
 
0.883
GCA_000975115_01136
Unannotated protein.
  
    0.867
GCA_000975115_01134
Unannotated protein.
       0.720
GCA_000975115_01138
Unannotated protein.
       0.615
GCA_000975115_00694
Unannotated protein.
 
   
 0.538
GCA_000975115_02043
Unannotated protein.
    
 0.517
GCA_000975115_01132
Unannotated protein.
       0.478
Your Current Organism:
Demequina oxidasica
NCBI taxonomy Id: 676199
Other names: D. oxidasica, Demequina oxidasica Ue et al. 2011, KCTC 19746, MBIC 08346, NBRC 106264
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.