STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000975115_02229Unannotated protein. (384 aa)    
Predicted Functional Partners:
GCA_000975115_01738
Unannotated protein.
    
  0.983
GCA_000975115_00229
Unannotated protein.
   
 0.954
GCA_000975115_01850
Unannotated protein.
   
 0.954
GCA_000975115_00862
Unannotated protein.
  
 0.948
GCA_000975115_00098
Unannotated protein.
    
 0.940
GCA_000975115_02083
Unannotated protein.
    
 0.924
GCA_000975115_01640
Unannotated protein.
    
  0.817
GCA_000975115_02379
Unannotated protein.
    
  0.817
GCA_000975115_00137
Unannotated protein.
    
  0.816
GCA_000975115_01734
Unannotated protein.
    
  0.816
Your Current Organism:
Demequina oxidasica
NCBI taxonomy Id: 676199
Other names: D. oxidasica, Demequina oxidasica Ue et al. 2011, KCTC 19746, MBIC 08346, NBRC 106264
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.