STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000975135_00064Unannotated protein. (140 aa)    
Predicted Functional Partners:
GCA_000975135_00571
Unannotated protein.
 
 
 
 0.999
GCA_000975135_00805
Unannotated protein.
    
 
 0.999
GCA_000975135_01338
Unannotated protein.
 
 
 
 0.999
GCA_000975135_01337
Unannotated protein.
  
 
 
 0.942
GCA_000975135_00984
Unannotated protein.
  
 
 
 0.935
GCA_000975135_01301
Unannotated protein.
  
 
 
 0.908
GCA_000975135_00065
Unannotated protein.
 
    0.895
GCA_000975135_01333
Unannotated protein.
  
     0.773
GCA_000975135_00063
Unannotated protein.
  
    0.742
GCA_000975135_00066
Unannotated protein.
 
     0.724
Your Current Organism:
Demequina aurantiaca
NCBI taxonomy Id: 676200
Other names: D. aurantiaca, Demequina aurantiaca Ue et al. 2011, KCTC 19745, MBIC 08347, NBRC 106265, marine actinobacterium YM12-102, strain YM12-102
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.