STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000975155_00372Unannotated protein. (218 aa)    
Predicted Functional Partners:
GCA_000975155_01907
Unannotated protein.
 
    0.970
GCA_000975155_01707
Unannotated protein.
 
  
 0.901
GCA_000975155_00371
Unannotated protein.
 
     0.869
GCA_000975155_01906
Unannotated protein.
 
  
 0.853
GCA_000975155_01272
Unannotated protein.
    
   0.841
GCA_000975155_00368
Unannotated protein.
       0.823
GCA_000975155_00367
Unannotated protein.
       0.822
GCA_000975155_00369
Unannotated protein.
       0.821
GCA_000975155_01367
Unannotated protein.
  
    0.796
GCA_000975155_00370
Unannotated protein.
       0.795
Your Current Organism:
Demequina globuliformis
NCBI taxonomy Id: 676202
Other names: D. globuliformis, Demequina globuliformis Ue et al. 2011, KCTC 19747, MBIC 08349, NBRC 106266, marine actinobacterium YM24-125, strain YM24-125
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.